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  journal cover  
Nature Volume 551 Issue 7678
 
This Week  
 
 
Editorials  
 
 
 
Frédéric Chopin's telltale heart
Scientists have written another chapter in the curious case of the composer's heart. But it is unlikely to be the end of the story.
Lower emissions on the high seas
Global regulations to limit carbon dioxide from the shipping industry are overdue.
Citation is not the only impact
A look at what we have published highlights the variety of editorial judgements in selecting and assessing papers.
 

Open up a world of new imaging strategies and possibilities with the latest upgrade to Nikon's always evolving A1R confocal microscope system. The all-new High Definition 1K Resonant Scanner delivers high resolution images at ultra-high speed. The new scanner also provides 4x the field of view at the same resolution usually generated by a normal 512x512 scanner.
World View  
 
 
 
University systems allow sexual harassers to thrive
It's time for academic institutions to take responsibility for protecting students and staff, says Laurel Issen.
 
Seven Days  
 
 
 
Interstellar visitor, Arctic shipwrecks and a retraction recommendation
The week in science: 27 November-2 November 2017.
Research Highlights  
 
 
 
This issue's Research Highlights
Selections from the scientific literature.
 
 
 

Enabling faster, better RT-PCR
 
Even with challenging RNA samples, you can get better results faster and easier than with any other one-step RT-PCR reagent. The Invitrogen SuperScript IV One-Step RT-PCR System combines high-processivity Invitrogen SuperScript IV Reverse Transcriptase and high-fidelity Invitrogen Platinum SuperFi DNA Polymerase to provide superior one-step RT-PCR performance.
 
 
 
News in Focus
 
Ageing satellites put crucial sea-ice climate record at risk​
Scientists scramble to avert disruption to data set that has tracked polar ice since the late 1970s.
Alexandra Witze
  Plans to promote German research excellence come under fire
Critics say selection process for high-stakes funding programme is flawed.
Quirin Schiermeier
Geneticists are starting to unravel evolution's role in mental illness
Hints emerge that past environments could have influenced psychiatric disorders.
Sara Reardon
  US March for Science group faces growing pains
A group of volunteers claims that the organization that spearheaded global protests in April has been unduly secretive about its management practices.
Emma Marris
Camouflage plumage patterns offer clue to dinosaur's habitat
Feathered carnivore was dark on top and light underneath, with a raccoon-like face.
John Pickrell
  Genomic studies track early hints of cancer
Pilot projects aim to pinpoint how benign tumours turn into lung, breast, prostate and pancreatic cancers.
Heidi Ledford
Features  
 
 
 
The new thermodynamics: how quantum physics is bending the rules
Experiments are starting to probe the limits of the classical laws of thermodynamics.
Zeeya Merali
Multimedia  
 
 
Nature: 02 November 2017
This week, squishy sea creatures, evolving verbs, and Earth's microbiome.
 
 
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Comment
 
Join the disruptors of health science
Thomas R. Insel's biggest lesson from his shift from NIMH director to Silicon Valley entrepreneur: academic and technology company researchers should partner up.
Thomas R. Insel
Lessons from first campus carbon-pricing scheme
Putting a value on emissions can lower energy use, write Kenneth Gillingham, Stefano Carattini and Daniel Esty.
Kenneth Gillingham, Stefano Carattini, Daniel Esty
Books and Arts  
 
 
 
Astrophysics: Chasing ghosts in Antarctica
Alexandra Witze welcomes a history of IceCube, an ambitious neutrino observatory.
Alexandra Witze
Books in brief
Barbara Kiser reviews five of the week's best science picks.
Barbara Kiser
Zoology: The joys of spinelessness
Lisa-ann Gershwin delights in two books on marine invertebrates.
Lisa-ann Gershwin
Correspondence  
 
 
 
Human embryos: Collect reliable data on embryo selection
Charis Thompson
  Night shifts: Circadian biology for public health
Charleen Adams, Erika Blacker, Wylie Burke
Crime fiction: Sherlock Holmes - a family likeness?
Eric L. Altschuler
  Forestry: Sustainability crisis brews in EU forestry
Janne S. Kotiaho, Markku Ollikainen, Jyri Seppälä
 
 
Specials
 
NATURE INDEX  
 
 
 
Testing times
Smriti Mallapaty
Trouble at the top
Look west for resistance
With the most to lose from looming federal funding cuts, California's researchers take a stand.
Katharine Gammon
Comment: Boosting research funding as uncertainty reigns
With government funding plummeting, researchers in the United States need to find alternative sources.
Scott Andes, Daniel Correa
Comment: Watching the players, not the scoreboard
National initiatives that track people, rather than papers, will lead to better science in the United States.
Julia Lane
The young and the restless
Initiatives are in place to keep early-career investigators in the biomedical system, but more support is needed.
Elie Dolgin
A state of substance
Key investments in people and infrastructure have helped Illinois become a major player in chemistry.
Cassandra Willyard
Proving Einstein right
The committed team behind LIGO's detection of gravitational waves is contending with ongoing technical challenges of a mighty big laboratory.
Katherine Bourzac
Q&A: The ground floor of discovery
Undergraduate research programmes are expensive, and the benefits can be hard to measure.
A guide to the Nature Index
A description of the terminology and methodology used in this supplement, and a guide to the functionality available free online at natureindex.com
 
 
Research
 
NEW ONLINE  
 
 
 
Cell biology: Bulky tether proteins aid membrane fusion
The energy source that drives vesicle fusion with a target organelle in vivo has been unclear. It emerges that proteins that tether fusing structures together also decrease the energy needed for the final fusion step.
Chemical biology: Organic dyes for deep bioimaging
Small-molecule organic dyes that fluoresce in the short-wave infrared region of the spectrum could improve the resolution of in vivo bioimaging methods. Such dyes have now been made by adapting those that fluoresce visible light.
Microbiology: Crowdsourcing Earth's microbes
A large-scale study has been assessing microbial diversity by analysing DNA sequences from samples submitted by scientists around the globe. The initial results are now being used to create an open-access resource.
Structures of transcription pre-initiation complex with TFIIH and Mediator
Cryo-electron microscopy structures of the yeast pre-initiation complex (PIC) and its complex with core Mediator provide insights into the opening of promoter DNA and the initiation of transcription.
Creation of forest edges has a global impact on forest vertebrates
Fragmentation of forest ecosystems produces forest edges, which affect the distribution of many analysed vertebrate species; smaller-bodied amphibians, larger reptiles and medium-sized mammals experience a larger reduction in suitable habitat than other forest-core species.
A communal catalogue reveals Earth’s multiscale microbial diversity OPEN
As phase 1 of the Earth Microbiome Project, analysis of 16S ribosomal RNA sequences from more than 27,000 environmental samples delivers a global picture of the basic structure and drivers of microbial distribution.
Structure of PINK1 in complex with its substrate ubiquitin
Granular materials flow like complex fluids
The relaxation dynamics of granular materials is more like that of complex fluids than that of thermal glass-forming systems, owing to the absence of the ‘cage effect’.
Nutrient co-limitation at the boundary of an oceanic gyre
Nutrient amendment experiments at the boundary of the South Atlantic gyre reveal extensive regions in which nitrogen and iron are co-limiting, with other micronutrients also approaching co-deficiency; such limitations potentially increase phytoplankton community diversity.
History-independent cyclic response of nanotwinned metals
In copper components containing highly oriented nanotwins, correlated ‘necklace’ dislocations moving back and forth offer an unusually fatigue-resistant response to engineering stress.
Drug-tolerant persister cancer cells are vulnerable to GPX4 inhibition
Cancer persister cells, which survive cytotoxic treatments, are shown to be sensitive to inhibition of the lipid hydroperoxidase GPX4.
Detecting evolutionary forces in language change
Analyses of digital corpora of annotated texts reveal the influence of stochastic drift versus selection in grammatical shifts in English and provide a general method for quantitatively testing theories of language change.
A tethering complex drives the terminal stage of SNARE-dependent membrane fusion
Tethering proteins, known to mediate initial recognition and attachment during membrane fusion, are essential for driving the transition from the hemifused state to fusion pore formation.
Kctd13 deletion reduces synaptic transmission via increased RhoA
Experimental evidence that global Kctd13 reduction leads to increased RhoA levels that reduce synaptic transmission, implicating RhoA as a potential therapeutic target for neuropsychiatric disorders associated with copy-number variants that include KCTD13.
Synaptotagmin 7 confers frequency invariance onto specialized depressing synapses
The calcium-sensing protein synaptotagmin 7 mediates facilitation that is masked by depression, but supports frequency-invariant transmission in mouse cerebellar and vestibular synapses.
Brief Communications Arising  
 
 
 
Untangling the dinosaur family tree
Max C. Langer, Martín D. Ezcurra, Oliver W. M. Rauhut et al.
Baron et al. reply
Matthew G. Baron, David B. Norman, Paul M. Barrett
News and Views  
 
 
 
Molecular evolution: No escape from the tangled bank
Joshua B. Plotkin
Gravitational waves: A golden binary
M. Coleman Miller
Biochemistry: The surprising history of an antioxidant
Mark W. Ruszczycky, Hung-wen Liu
 
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Chromosome biology: How to build a cohesive genome in 3D
Rachel Patton McCord
 
Theoretical physics: Quarks fuse to release energy
Gerald A. Miller
Neurobiology: A change of fate for nerve repair
Robert H. Miller
   
Articles  
 
 
 
The dynamics of molecular evolution over 60,000 generations
Using data from sixty thousand generations of the E. coli long-term evolution experiment, the authors shed new light on the processes that govern molecular evolution.
Benjamin H. Good, Michael J. McDonald, Jeffrey E. Barrick et al.
Two independent modes of chromatin organization revealed by cohesin removal
Depletion of chromosome-associated cohesin leads to loss of topologically associating domains in interphase chromosomes, without affecting segregation into compartments, and instead, it unmasks a finer compartment structure that reflects local chromatin and transcriptional activity.
Wibke Schwarzer, Nezar Abdennur, Anton Goloborodko et al.
Structure of phycobilisome from the red alga Griffithsia pacifica
Single-particle cryo-electron microscopy is used to resolve the structure of the phycobilisome, a 16.8-megadalton light-harvesting megacomplex, from the red alga Griffithsia pacifica at a resolution of 3.5 Å.
Jun Zhang, Jianfei Ma, Desheng Liu et al.
Letters  
 
 
 
IL-1R8 is a checkpoint in NK cells regulating anti-tumour and anti-viral activity
Interleukin-1 receptor 8 (IL-1R8), a negative regulator of the IL-1 family of cytokines, restrains the activity of natural killer (NK) cells, suggesting that IL-1R8 acts as a checkpoint regulator of NK cell activation and that its blockade may be of use in cancer therapy.
Martina Molgora, Eduardo Bonavita, Andrea Ponzetta et al.
A global resource allocation strategy governs growth transition kinetics of Escherichia coli
A new approach to modelling bacterial growth removes the need to know kinetic parameters for metabolic and regulatory processes and can be used to model adaptive processes such as antibiotic responses and ecological dynamics.
David W. Erickson, Severin J. Schink, Vadim Patsalo et al.
Embryonic epigenetic reprogramming by a pioneer transcription factor in plants
The seed-specific transcription factor LEC1 promotes an active chromatin state at the floral repressor FLC and activates its expression in the Arabidopsis pro-embryo, thus reversing the winter cold-induced silenced state that is inherited from gametes.
Zeng Tao, Lisha Shen, Xiaofeng Gu et al.
The X-ray counterpart to the gravitational-wave event GW170817
Detection of X-ray emission at a location coincident with the kilonova transient of the gravitational-wave event GW170817 provides the missing observational link between short γ-ray bursts and gravitational waves from neutron-star mergers.
E. Troja, L. Piro, H. van Eerten et al.
Reversing SKI–SMAD4-mediated suppression is essential for TH17 cell differentiation
TGFβ signalling regulates T helper 17 (TH17) cell differentiation by reversing SKI–SMAD4-mediated suppression of RORγt, revealing a potential therapeutic target for treating TH17-related diseases.
Song Zhang, Motoki Takaku, Liyun Zou et al.
Quark-level analogue of nuclear fusion with doubly heavy baryons
Two singly charmed baryons can fuse into the recently discovered doubly charmed baryon and a neutron through an exothermic reaction analogous to the nuclear fusion between deuterium and tritium.
Marek Karliner, Jonathan L. Rosner
Single-cell RNA sequencing reveals a signature of sexual commitment in malaria parasites
Highly parallel single-cell transcriptome profiling of Plasmodium falciparum blood stages provides insight into the role AP2-G plays in early sexual development of this eukaryotic pathogen.
Asaf Poran, Christopher Nötzel, Omar Aly et al.
Single-cell transcriptomics reconstructs fate conversion from fibroblast to cardiomyocyte
Single-cell transcriptomics analyses of cell intermediates during the reprogramming from fibroblast to cardiomyocyte were used to reconstruct the reprogramming trajectory and to uncover intermediate cell populations, gene pathways and regulators involved in this process.
Ziqing Liu, Li Wang, Joshua D. Welch et al.
Optical emission from a kilonova following a gravitational-wave-detected neutron-star merger
Optical to near-infrared observations of a transient coincident with the detection of the gravitational-wave signature of a binary neutron-star merger and a low-luminosity short-duration γ-ray burst are presented and modelled.
Iair Arcavi, Griffin Hosseinzadeh, D. Andrew Howell et al.
Spectroscopic identification of r-process nucleosynthesis in a double neutron-star merger
Observations of the transient associated with the gravitational-wave event GW170817 and γ-ray burst GRB 170817A reveal a bright kilonova with fast-moving ejecta, including lanthanides synthesized by rapid neutron capture.
E. Pian, P. D’Avanzo, S. Benetti et al.
Glucose feeds the TCA cycle via circulating lactate
Metabolic flux analysis in mice reveals that lactate often acts as the primary carbon source for the tricarboxylic acid cycle both in normal tissues and in tumour microenvironments.
Sheng Hui, Jonathan M. Ghergurovich, Raphael J. Morscher et al.
A kilonova as the electromagnetic counterpart to a gravitational-wave source
Observations and modelling of an optical transient counterpart to a gravitational-wave event and γ-ray burst reveal that neutron-star mergers produce gravitational waves and radioactively powered kilonovae, and are a source of heavy elements.
S. J. Smartt, T.-W. Chen, A. Jerkstrand et al.
Origin of the heavy elements in binary neutron-star mergers from a gravitational-wave event
Modelling the electromagnetic emission of kilonovae enables the mass, velocity and composition (with some heavy elements) of the ejecta from a neutron-star merger to be derived from the observations.
Daniel Kasen, Brian Metzger, Jennifer Barnes et al.
A gravitational-wave standard siren measurement of the Hubble constant
The astronomical event GW170817, detected in gravitational and electromagnetic waves, is used to determine the expansion rate of the Universe, which is consistent with and independent of existing measurements.
The LIGO Scientific Collaboration and The Virgo Collaboration, and other consortia
Association analysis identifies 65 new breast cancer risk loci
Association analysis identifies 65 new breast cancer risk loci, predicts target genes for known risk loci and demonstrates a strong overlap with somatic driver genes in breast tumours.
Kyriaki Michailidou, Sara Lindström, Joe Dennis et al.
 
 
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Careers & Jobs
 
Feature  
 
 
 
Competitions: Grand challenges
Virginia Gewin
Q&AS  
 
 
 
Turning point: Industry immigrant
Virginia Gewin
Futures  
 
 
The palimpsest planet
S R Algernon has a rare brush with blossoming life.
S. R. Algernon
 
 
 
 
 

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