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Nature Volume 531 Issue 7594
 
This Week  
 
 
Editorials  
 
 
 
Africa’s elite
A new forum promises to bring deserved prestige to outstanding African researchers, and demonstrates the continent’s untapped potential.
Metropolis now
Growing urbanization is heralding a new era of science in the city.
Practical DNA
The promise of DNA origami shows signs of coming to fruition a decade after its debut.
 
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World View  
 
 
 
The elephant in the room we can’t ignore
If Donald Trump were to trigger a crisis in Western democracy, scientists would need to look at their part in its downfall, says Colin Macilwain.
 
Seven Days  
 
 
 
The week in science: 11–17 March 2016
Tilikum has incurable lung disease; UK scientists want to stay in the EU; and WHO holds emergency mosquito-control meeting.
Research Highlights  
 
 
 
Animal behaviour: Order of notes is key in bird calls | Cardiovascular biology: Gut microbes raise heart-attack risk | Chemical engineering: Waste gas makes liquid fuel | Cancer: Gene blocks anti-tumour response | Neuroscience: Altered sensations in anxiety | Microbiology: Bacterial toxins invite infections | Biomechanics: How flying beetles waterski | Astronomy: Milky Way's bulging waistline | Longevity: Genetic switches for long life
 
 
 
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April 7-9, 2016 | Ocean Hotel, Guangzhou, China
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News in Focus
 
‘Brain doping’ may improve athletes’ performance
Electrical stimulation seems to boost endurance in preliminary studies.
Sara Reardon
  What Google’s winning Go algorithm will do next
AlphaGo’s techniques could have broad uses, but moving beyond games is a challenge.
Elizabeth Gibney
Fermat's last theorem earns Andrew Wiles the Abel Prize
Mathematician receives coveted award for solving three-century-old problem in number theory.
Davide Castelvecchi
  NASA Mars woes could delay other planetary missions
Plan to postpone launch of InSight probe will cost agency an extra US$150 million.
Devin Powell
Mars launch to test collaboration between Europe and Russia
Joint ExoMars mission launches lander and orbiter — a rover is planned for 2018.
Elizabeth Gibney
  Oldest ancient-human DNA details dawn of Neanderthals
Sequence of 430,000-year-old DNA pushes back divergence of humans and Neanderthals.
Ewen Callaway
Features  
 
 
 
On the hunt for a mystery planet
Scientists are searching for an unseen world at the fringes of the solar system.
Alexandra Witze
The red-hot debate about transmissible Alzheimer's
A controversial study has suggested that the neurodegenerative disease might be transferred from one person to another. Now scientists are racing to find out whether that is true.
Alison Abbott
Multimedia  
 
 
Nature Podcast: 17 March 2016
This week, retrieving lost memories, nailing down China's emissions, and is Alzheimer's transmissible?
 
 
Comment
 
Reproducibility: Team up with industry
Combining commercial and academic incentives and resources can improve science, argues Aled Edwards.
Aled Edwards
Books and Arts  
 
 
 
Museums: Ethics of exhibition
David Hurst Thomas explores the controversies over collections of human remains and plundered artefacts.
David Hurst Thomas
Books in brief
Barbara Kiser reviews five of the week's best science picks.
Barbara Kiser
Entomology: Nabokov's scientific artistry
Vladimir Lukhtanov delights in a treatise on the luminary's contribution to biology.
Vladimir Lukhtanov
Correspondence  
 
 
 
Australia: Short-sighted to cut environment posts
David Lindenmayer
  Environment: China draws lines to green future
Sang Weiguo, Jan C. Axmacher
Advisory network: Six principles for EU peer review
William Cockburn, Hubert Deluyker
  Junior researchers: Hasty publication compromises rigour
Shraddha Madhav Karve, Madhur Mangalam
IPBES: Biodiversity central to food security
Fabrice DeClerck
 
 
 
Specials
 
TECHNOLOGY FEATURE  
 
 
 
Living factories of the future
Scientists are designing cells that can manufacture drugs, food and materials — and even act as diagnostic biosensors. But first they must agree on a set of engineering tools.
Michael Eisenstein
Outlook: Urban health and well-being  
 
 
 
Urban health and well-being
Richard Hodson
  The rise of the urbanite
Stephanie Pain
Mobility: The urban downshift
Sarah DeWeerdt
  Flooding: Water potential
James M. Gaines
Green space: A natural high
Natasha Gilbert
  Stress: The privilege of health
Amy Maxmen
Perspective: City farming needs monitoring
Andrew A. Meharg
  Disease: Poverty and pathogens
Michael Eisenstein
Policy: Urban physics
Kevin Pollock
 
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NATURE INDEX  
 
 
 
Nature Index 2016 Japan
Nicky Phillips
A network of knowledge
Research breakthroughs are a global pursuit, and while there is healthy rivalry between nations, Japan and its strongest competitors are increasingly joining forces.
Larissa Kogleck
Flagging fortunes invite reform
Japan's quest to retain its status as a global research leader by enticing foreign students and faculty is the right response, say observers, but efforts are yet to have an impact.
Ichiko Fuyuno
Eye on the prize, but grasp loosens
In most of the past 15 years, Japanese scientists have been named Nobel Laureates for work in chemistry and physics, but illustrious awards may be harder to come by in the next era.
Tim Hornyak
Swimming against the tide
The rising stars on Japan's research landscape include traditional big-hitters and newer institutions selected for initiatives to boost their global standing and promote autonomy.
Mark Zastrow
Top teams to be reckoned with
Japan's institutions are increasingly joining huge collaborative research efforts, realizing that, on the big questions facing science, a problem shared is a problem halved.
Smriti Mallapaty, Simon Pleasants, Nicky Phillips
A guide to the Nature Index
A description of the terminology and methodology used in this supplement, and a guide to the functionality available free online at natureindex.com.
 
 
Research
 
NEW ONLINE  
 
 
 
Microbial oceanography: Viral strategies at sea
The finding that marine environments with high levels of host microbes have fewer viruses per host than when host abundance is low challenges a theory on the relative roles of lysogenic and lytic viral-survival strategies.
Cancer immunotherapy: Killers on sterols
Increasing cholesterol levels in the cell membranes of killer T cells boosts the cells' ability to mount an immune response against tumour cells in mice. Such a strategy might be valuable in anticancer immunotherapies.
Alzheimer's disease: Lost memories found
Enhancing synaptic connections between neurons in the brain's hippocampus that are normally activated during memory formation rescues memory deficits in a mouse model of early Alzheimer's disease.
Deletions linked to TP53 loss drive cancer through p53-independent mechanisms
The loss of the TP53 gene is often involved in the development of human cancer; here, the deletion of other genes in the vicinity is shown also to contribute to cancer progression in a mouse model.
Lytic to temperate switching of viral communities
An analysis of 24 coral reef viromes challenges the view that lytic phage are believed to predominate when the density of their hosts increase and shows instead that lysogeny is more important at high host densities; the authors also show that this model is consistent with predator–prey dynamics in a range of other ecosystems, such as animal-associated, sediment and soil systems.
Visualization of immediate immune responses to pioneer metastatic cells in the lung
Tracing the fate of circulating tumour cells by intravital two-photon lung imaging shows that tumours produce microparticles as they arrive and these migrate along the lung vasculature and are mostly taken up by interstitial myeloid cells, in a process that contributes to metastatic seeding; a minor subset of microparticles is engulfed by conventional dendritic cells, which are thought to contribute to the initiation of an anti-tumour immune response in lung-draining lymph nodes.
Modes of surface premelting in colloidal crystals composed of attractive particles
Incomplete premelting at the edges of monolayer colloidal crystals is triggered by a bulk solid–solid phase transition and truncated by a mechanical instability that induces homogeneous bulk melting of the crystal; these observations challenge existing theories of two-dimensional melting.
The ‘Tully monster’ is a vertebrate
The Tully monster (Tullimonstrum), a problematic fossil from the 309–307-million-year-old Mazon Creek biota of Illinois, is shown to be not only a vertebrate but also akin to lampreys, increasing the morphological disparity of that group.
Mycocerosic acid synthase exemplifies the architecture of reducing polyketide synthases
A hybrid crystal structure of Mycobacterium smegmatis mycocerosic acid synthase, a multienzyme involved in the biosynthesis of mycobacterial branched-chain fatty acids, exemplifies the organization of fully-reducing polyketide synthases.
Boreal and temperate trees show strong acclimation of respiration to warming
Acclimation of leaf respiration to a 3–5-year period of warming by 3.4 °C for 10 North American tree species in forest conditions eliminates 80% of the increase in leaf respiration expected of non-acclimatized trees; this suggests that the increase in respiration rates of terrestrial plants from climate warming, and the associated increase in atmospheric CO2 levels, may be less than anticipated.
Acceleration of petaelectronvolt protons in the Galactic Centre
Deep γ-ray observations of the Galactic Centre with arcminute angular resolution show traces of petaelectronvolt protons within the central ten parsecs of our Galaxy; the accelerator of these particles could have provided a substantial contribution to Galactic cosmic rays in the past.
Memory retrieval by activating engram cells in mouse models of early Alzheimer’s disease
Experiments in transgenic mouse models of early Alzheimer’s disease show that the amnesia seen at this stage of the disease is probably caused by a problem with memory retrieval from the hippocampus rather than an encoding defect.
PGC1α drives NAD biosynthesis linking oxidative metabolism to renal protection
PGC1α protects against kidney injury by upregulating enzymes that enhance nicotinamide adenine dinucleotide (NAD) and driving local accumulation of the fatty acid breakdown product β-hydroxybutyrate, which leads to increased production of the renoprotective prostaglandin E2.
The amino acid sensor GCN2 controls gut inflammation by inhibiting inflammasome activation
The GCN2 kinase is shown to have a protective role in the regulation of intestinal inflammation during amino acid starvation in a mouse model of colitis.
Nuclear DNA sequences from the Middle Pleistocene Sima de los Huesos hominins
Nuclear DNA sequences from Middle Pleistocene Sima de los Huesos hominins show they were more closely related to Neanderthals than to Denisovans, and indicate a population divergence between Neanderthals and Denisovans that predates 430,000 years ago.
Derivation and differentiation of haploid human embryonic stem cells
Haploid human embryonic stem cells have been derived from haploid oocytes, the cells maintain a normal haploid karyotype as pluripotent cells and, unexpectedly, as differentiated cells — loss-of-function genetic screens previously performed with haploid embryonic stem cells in mice can now be performed in humans.
Potentiating the antitumour response of CD8+ T cells by modulating cholesterol metabolism
Modulating cholesterol metabolism can improve CD8+ T-cell-mediated immunity against tumours; genetic or pharmacological inhibition of the cholesterol esterification enzyme ACAT1 led to higher plasma membrane cholesterol levels, better T-cell receptor clustering and signalling, improved immunological synapse maturation, and enhanced antitumour activity in mice.
Erratum: Epithelial tricellular junctions act as interphase cell shape sensors to orient mitosis
Corrigendum: CEACAM1 regulates TIM-3-mediated tolerance and exhaustion
Brief Communications Arising  
 
 
 
Dry-season greening of Amazon forests
Scott R. Saleska, Jin Wu, Kaiyu Guan et al.
Morton et al. reply
Douglas C. Morton, Jyoteshwar Nagol, Claudia C. Carabajal et al.
News and Views  
 
 
 
Materials science: How crystals get an edge
Anna Fontcuberta i Morral
Biomedicine: Visionary stem-cell therapies
Julie T. Daniels
50 & 100 Years Ago
 
Advertising.
Global warming: China’s contribution to climate change
Dominick V. Spracklen
 
Microrobotics: Swimmers by design
Igor S. Aranson
Virology: The X-Files of hepatitis B
T. Jake Liang
 
Coral reefs: Turning back time
Janice M. Lough
Articles  
 
 
 
Observing cellulose biosynthesis and membrane translocation in crystallo
Here the authors use in crystallo enzymology to obtain structural snapshots of a complete cellulose biosynthesis cycle and reveal the mechanism by which the bacterial cellulose synthase BcsA–BcsB translocates the nascent cellulose polymer.
Jacob L. W. Morgan, Joshua T. McNamara, Michael Fischer et al.
Crystal structures of the M1 and M4 muscarinic acetylcholine receptors
X-ray crystal structures of the M1 and M4 muscarinic acetylcholine receptors, revealing differences in the orthosteric and allosteric binding sites that help to explain the subtype selectivity of drugs targeting this family of receptors.
David M. Thal, Bingfa Sun, Dan Feng et al.
Interface dynamics and crystal phase switching in GaAs nanowires
Crystal phase switching between zinc-blende and wurtzite phases during the growth of gallium arsenide nanowires is observed experimentally, and explained via changes in the geometry of the catalytic droplet sitting on top of the growing nanowire.
Daniel Jacobsson, Federico Panciera, Jerry Tersoff et al.
Lens regeneration using endogenous stem cells with gain of visual function
A new procedure for cataract removal that preserves lens epithelial progenitor cells in mammals, which require Pax6 and Bmi1 for their self-renewal, achieves lens regeneration in rabbits, macaques and in infants with cataracts.
Haotian Lin, Hong Ouyang, Jie Zhu et al.
Letters  
 
 
 
Vast assembly of vocal marine mammals from diverse species on fish spawning ground
Vocalizations were recorded for over eight distinct whale species as they converged on a shoal of herring to feed; the predators divided the shoal into overlapping but species-specific foraging sectors and the activities of the whales changed between day and night.
Delin Wang, Heriberto Garcia, Wei Huang et al.
Three-dimensional control of the helical axis of a chiral nematic liquid crystal by light
Chiral nematic liquid crystals are self-organized helical superstructures in which the helices can stand or lie, and lie in either a uniform or a random way; here, the helices are reversibly driven from a standing arrangement to a uniform lying arrangement and then rotated in-plane—solely by light.
Zhi-gang Zheng, Yannian Li, Hari Krishna Bisoyi et al.
Late Tharsis formation and implications for early Mars
By calculating the rotational figure of Mars and its surface topography before the Tharsis volcanic region caused true polar wander, it is shown that Tharsis formed during the Noachian and Hesperian periods at about the same time as the valley networks; early Mars climate simulations suggest icy precipitation in a latitudinal band in the southern hemisphere.
Sylvain Bouley, David Baratoux, Isamu Matsuyama et al.
Therapeutic efficacy of the small molecule GS-5734 against Ebola virus in rhesus monkeys
The discovery is reported of a small molecule drug, GS-5734, which has antiviral activity against Ebola virus and other filoviruses, and is capable of providing post-exposure therapeutic protection against lethal disease in 100% of drug-treated nonhuman primates infected with Ebola virus; the drug targets viral RNA polymerase and can distribute to sanctuary sites (such as testes, eyes and brain), suggesting that it may be able to clear persistent virus infection.
Travis K. Warren, Robert Jordan, Michael K. Lo et al.
Reversal of ocean acidification enhances net coral reef calcification
A manipulative experiment in which a reef is alkalinized in situ shows that calcification rates are likely to be lower already than they were in pre-industrial times because of acidification.
Rebecca Albright, Lilian Caldeira, Jessica Hosfelt et al.
Enhancing coherence in molecular spin qubits via atomic clock transitions
Magnetic molecules are candidates for solid-state spin qubits from which a quantum computer might be constructed, but the magnetic interactions between such molecules typically lead to unwanted decoherence; now magnetic molecules have been designed in such a way that their spin dynamics are energetically protected against the decoherence-inducing interactions.
Muhandis Shiddiq, Dorsa Komijani, Yan Duan et al.
Sensory experience regulates cortical inhibition by inducing IGF1 in VIP neurons
Igf1 is identified in mice as an experience-induced gene that functions cell-autonomously to increase inhibitory input onto a disinhibitory subtype of GABAergic neurons in the cortex, affecting the downstream excitation–inhibition balance within circuits that regulate visual acuity, and providing a novel example of experience modulating neural plasticity.
A. R. Mardinly, I. Spiegel, A. Patrizi et al.
Co-ordinated ocular development from human iPS cells and recovery of corneal function
A protocol has been developed to use human induced pluripotent stem cells to obtain a self-formed ectodermal autonomous multizone, which includes distinct cell lineages of the eye, including the ocular surface ectoderm, lens, neuro-retina, and retinal pigment epithelium that can be expanded to form a functional corneal epithelium when transplanted to an animal model of corneal visual impairment.
Ryuhei Hayashi, Yuki Ishikawa, Yuzuru Sasamoto et al.
The contribution of China’s emissions to global climate forcing
Using a global coupled biogeochemistry–climate model and a chemistry and transport model reveals that China’s present-day global radiative forcing is about ten per cent of the current global total, made up of both warming and cooling contributions; if in the future China reduces the cooling forcings, global warming could accelerate.
Bengang Li, Thomas Gasser, Philippe Ciais et al.
Crystal structure of a substrate-engaged SecY protein-translocation channel
The crystal structure of a substrate-engaged SecY channel and the SecA ATPase, which provides molecular insight into the process of protein translocation across membranes.
Long Li, Eunyong Park, JingJing Ling et al.
Sequence-dependent but not sequence-specific piRNA adhesion traps mRNAs to the germ plasm
Maternal mRNAs are tethered within the Drosophila germ plasm via base-pairing interactions between mRNAs and piRNPs containing the Aub Piwi protein; the preference for certain mRNAs to be tethered appears to be related to their longer length, which provides more potential piRNP-binding sites, and the results suggest a new role for piRNAs in germ-cell specification independent of their role in transposon silencing.
Anastassios Vourekas, Panagiotis Alexiou, Nicholas Vrettos et al.
Positron annihilation signatures associated with the outburst of the microquasar V404 Cygni
Observations of γ-ray emission from the microquasar V404 Cygni during a recent period of strong flaring activity show spectral features at around 511 kiloelectronvolts, which are clear signatures of variable positron annihilation, implying a high rate of positron production.
Thomas Siegert, Roland Diehl, Jochen Greiner et al.
Hepatitis B virus X protein identifies the Smc5/6 complex as a host restriction factor
Hepatitis B virus X protein stimulates transcription from the viral DNA episome by hijacking the host ubiquitin machinery to target the Smc5/6 complex for degradation.
Adrien Decorsière, Henrik Mueller, Pieter C. van Breugel et al.
Corrigenda  
 
 
 
Corrigendum: Domains of genome-wide gene expression dysregulation in Down’s syndrome
Audrey Letourneau, Federico A. Santoni, Ximena Bonilla et al.
Corrigendum: Failure to replicate the STAP cell phenomenon
Alejandro De Los Angeles, Francesco Ferrari, Yuko Fujiwara et al.
Corrigendum: Hallmarks of pluripotency
Alejandro De Los Angeles, Francesco Ferrari, Ruibin Xi et al.
 
 
Nature Outlook Cognitive Health

This Nature Outlook investigates some of the strategies that can be used to keep our brains in top form when faced with social and biological factors that induce deterioration.

Available free online

Produced with support from: Nestlé Research
 
 
Careers & Jobs
 
Feature  
 
 
 
Career planning: Question time
Paul Smaglik
Q&AS  
 
 
 
Trade talk: Funding fixer
Monya Baker
Futures  
 
 
Genius loci
Interactive fieldwork.
S. R. Algernon
 
 
 
 
 

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natureevents directory featured events

 
 
 
 

14th Annual Meeting of Association for Cancer Immunotherapy

 
 

10 May 2016 Mainz, Germany

 
 
 
 

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